I am a research scientist at Bioptimus, where I work on multimodal and multiscale foundation models for biological data. Previously, I was a PhD student in computer science at ETH Zürich and the Max Planck Institute for Intelligent Systems, and a student researcher on the applied science team at Google Research, advised by Gunnar Rätsch and Bernhard Schölkopf and supported by the CLS fellowship.
Before that, I completed my MSc in computer science at EPFL as a research scholar with Patrick Thiran and Matthias Grossglauser, and spent the final year of my MSc as an intern at RIKEN AIP Tokyo with Emtiyaz Khan.
I am interested in deep learning and probabilistic methods and their applications to science.
Contact: mail AT aleximmer.com
Publications
ZAPBench: A Benchmark for Whole-Brain Activity Prediction in Zebrafish
ICLR, 2025
Shaving weights with Occam's razor: Bayesian sparsification for neural networks using the marginal likelihood
NeurIPS, 2024
Advances in Bayesian Model Selection and Uncertainty Estimation for Deep Learning
ETH Zurich (Doctoral Thesis), 2024
Towards Training Without Depth Limits: Batch Normalization Without Gradient Explosion
ICLR, 2024
Effective Bayesian Heteroscedastic Regression with Deep Neural Networks
NeurIPS, 2023
Kronecker-Factored Approximate Curvature for Modern Neural Network Architectures
NeurIPS, 2023
On the Identifiability and Estimation of Causal Location-Scale Noise Models
ICML, 2023
Invariance Learning in Deep Neural Networks with Differentiable Laplace Approximations
NeurIPS, 2022
Scalable Marginal Likelihood Estimation for Model Selection in Deep Learning
ICML, 2021
Improving predictions of Bayesian neural networks via local linearization
AISTATS, 2021
Continual Deep Learning by Functional Regularisation of Memorable Past
NeurIPS 2020 (oral), 2020
Sub-Matrix Factorization for Real-Time Vote Prediction
KDD (oral), 2020
Disentangling the Gauss-Newton Method and Approximate Inference for Neural Networks
EPFL MSc Thesis, 2020
Efficient Learning of Smooth Probability Functions from Bernoulli Tests with Guarantees
ICML, 2019